Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase subunit c | SAMN04244553_6542 | Not Available | Negative | 6994146 - 6994538 | 15089.0 |
| fumarate reductase iron-sulfur subunit | SAMN04244553_6543 | Not Available | Negative | 6994535 - 6995278 | 27880.3 |
| succinate dehydrogenase subunit a | SAMN04244553_6544 | Not Available | Negative | 6995284 - 6997026 | 63367.2 |
| hypothetical protein | SAMN04244553_6545 | Not Available | Negative | 6997052 - 6997285 | 8783.28 |
| atp-binding cassette, subfamily b | SAMN04244553_6546 | Not Available | Negative | 6997377 - 6999158 | 65307.6 |
| hypothetical protein | SAMN04244553_6547 | Not Available | Positive | 6999198 - 6999458 | 9316.5 |
| alanine dehydrogenase | SAMN04244553_6548 | Not Available | Positive | 6999626 - 7000735 | 38688.3 |
| transcriptional regulator, tetr family | SAMN04244553_6549 | Not Available | Positive | 7000938 - 7002179 | 45092.3 |
| hypothetical protein | SAMN04244553_6550 | Not Available | Positive | 7002382 - 7004217 | 66523.1 |
| hypothetical protein | SAMN04244553_6551 | Not Available | Negative | 7004525 - 7006330 | 65081.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

