Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | SAMN04244553_6501 | Not Available | Negative | 6951212 - 6952579 | 50057.9 |
| hypothetical protein | SAMN04244553_6502 | Not Available | Negative | 6952569 - 6953210 | 22196.8 |
| acetyl esterase | SAMN04244553_6503 | Not Available | Positive | 6953331 - 6954290 | 34594.0 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SAMN04244553_6504 | Not Available | Positive | 6954453 - 6955493 | 35654.7 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04244553_6505 | Not Available | Positive | 6955603 - 6956466 | 31571.2 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04244553_6506 | Not Available | Positive | 6956555 - 6957823 | 44832.6 |
| mspa protein | SAMN04244553_6507 | Not Available | Positive | 6958017 - 6958670 | 21503.3 |
| mspa protein | SAMN04244553_6508 | Not Available | Positive | 6958736 - 6959401 | 22253.9 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04244553_6509 | Not Available | Positive | 6959483 - 6960355 | 31586.2 |
| hypothetical protein | SAMN04244553_6510 | Not Available | Positive | 6960497 - 6961189 | 25089.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

