Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | SAMN04244553_6478 | Not Available | Positive | 6928170 - 6929381 | 44373.4 |
| dna-binding transcriptional regulator, arsr family | SAMN04244553_6479 | Not Available | Negative | 6929371 - 6929775 | 14822.8 |
| hypothetical protein | SAMN04244553_6480 | Not Available | Negative | 6929904 - 6930032 | 4268.08 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_6483 | Not Available | Positive | 6931982 - 6932833 | 31514.0 |
| hypothetical protein | SAMN04244553_6484 | Not Available | Positive | 6932888 - 6933229 | 12265.4 |
| unspecific monooxygenase | SAMN04244553_6485 | Not Available | Positive | 6933226 - 6934623 | 53823.0 |
| short-chain dehydrogenase | SAMN04244553_6487 | Not Available | Negative | 6935140 - 6935886 | 25155.2 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN04244553_6488 | Not Available | Negative | 6935883 - 6936890 | 36278.0 |
| hypothetical protein | SAMN04244553_6489 | Not Available | Negative | 6936902 - 6938110 | 42958.3 |
| transcriptional regulator, tetr family | SAMN04244553_6490 | Not Available | Negative | 6938219 - 6939037 | 30202.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

