Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04244553_6468 | Not Available | Negative | 6916579 - 6917499 | 32574.6 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04244553_6469 | Not Available | Positive | 6917606 - 6918469 | 30993.6 |
| peptide/nickel transport system permease protein | SAMN04244553_6470 | Not Available | Positive | 6918473 - 6919420 | 33791.8 |
| peptide/nickel transport system permease protein | SAMN04244553_6471 | Not Available | Positive | 6919417 - 6920271 | 29466.4 |
| peptide/nickel transport system atp-binding protein | SAMN04244553_6472 | Not Available | Positive | 6920268 - 6921869 | 56588.3 |
| peptide/nickel transport system substrate-binding protein | SAMN04244553_6473 | Not Available | Positive | 6921862 - 6923565 | 61625.4 |
| a-factor biosynthesis hotdog domain-containing protein | SAMN04244553_6474 | Not Available | Positive | 6923606 - 6924601 | 36380.8 |
| putative hydrolase of the had superfamily | SAMN04244553_6475 | Not Available | Positive | 6924598 - 6925263 | 24311.8 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04244553_6476 | Not Available | Negative | 6925272 - 6926693 | 50813.6 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_6477 | Not Available | Positive | 6926845 - 6928173 | 44777.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

