Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN04244553_0743 | Not Available | Negative | 571319 - 572242 | 32529.1 |
| nhap-type na+/h+ or k+/h+ antiporter | SAMN04244553_0744 | Not Available | Negative | 572394 - 573641 | 42724.6 |
| amphi-trp domain-containing protein | SAMN04244553_0745 | Not Available | Negative | 573758 - 574057 | 10738.3 |
| diacylglycerol kinase family enzyme | SAMN04244553_0746 | Not Available | Negative | 574165 - 575511 | 47349.4 |
| hypothetical protein | SAMN04244553_0747 | Not Available | Negative | 575648 - 576079 | 15488.0 |
| secretory lipase | SAMN04244553_0748 | Not Available | Negative | 576220 - 577455 | 43517.3 |
| kynurenine formamidase | SAMN04244553_0749 | Not Available | Positive | 577627 - 578283 | 23261.1 |
| cholesterol oxidase | SAMN04244553_0750 | Not Available | Negative | 578290 - 580023 | 62267.0 |
| merr hth family regulatory protein | SAMN04244553_0751 | Not Available | Positive | 580113 - 580808 | 25594.3 |
| transcriptional regulator, tetr family | SAMN04244553_0752 | Not Available | Positive | 580835 - 581539 | 25349.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

