Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty-acyl-coa synthase | SAMN04244553_6445 | Not Available | Negative | 6894360 - 6895997 | 58699.4 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN04244553_6447 | Not Available | Negative | 6896177 - 6897400 | 43362.5 |
| hypothetical protein | SAMN04244553_6448 | Not Available | Negative | 6897474 - 6898112 | 23265.0 |
| atp-dependent helicase hrpa | SAMN04244553_6449 | Not Available | Positive | 6898252 - 6902316 | 149802.0 |
| transcriptional repressor nrdr | SAMN04244553_6450 | Not Available | Negative | 6902403 - 6902873 | 17390.5 |
| hypothetical protein | SAMN04244553_6451 | Not Available | Negative | 6902994 - 6904241 | 45061.8 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04244553_6452 | Not Available | Negative | 6904317 - 6905195 | 30373.8 |
| transcriptional regulator, tetr family | SAMN04244553_6453 | Not Available | Positive | 6905285 - 6906025 | 26349.3 |
| hypothetical protein | SAMN04244553_6454 | Not Available | Negative | 6906092 - 6906538 | 15817.8 |
| repressor lexa | SAMN04244553_6455 | Not Available | Positive | 6906747 - 6907478 | 25903.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

