Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN04244553_6435 | Not Available | Negative | 6884696 - 6885469 | 28362.8 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN04244553_6436 | Not Available | Negative | 6885537 - 6886472 | 32969.3 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN04244553_6437 | Not Available | Positive | 6886556 - 6887143 | 21499.2 |
| alkyl hydroperoxide reductase subunit d | SAMN04244553_6438 | Not Available | Positive | 6887251 - 6887790 | 18989.6 |
| phenazine biosynthesis protein phzf family | SAMN04244553_6439 | Not Available | Positive | 6887932 - 6888633 | 25370.0 |
| hypothetical protein | SAMN04244553_6440 | Not Available | Negative | 6888644 - 6889267 | 21781.8 |
| predicted metal-dependent peptidase | SAMN04244553_6441 | Not Available | Negative | 6889349 - 6891178 | 66578.9 |
| moxr-like atpase | SAMN04244553_6442 | Not Available | Negative | 6891181 - 6892239 | 38747.7 |
| arac-type dna-binding protein | SAMN04244553_6443 | Not Available | Negative | 6892317 - 6893369 | 38526.2 |
| short-chain dehydrogenase | SAMN04244553_6444 | Not Available | Positive | 6893570 - 6894298 | 25084.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

