Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_6425 | Not Available | Negative | 6873668 - 6874372 | 24336.0 |
| predicted atp-dependent carboligase, atp-grasp superfamily | SAMN04244553_6426 | Not Available | Positive | 6874677 - 6875609 | 34046.6 |
| helicase conserved c-terminal domain-containing protein | SAMN04244553_6427 | Not Available | Positive | 6875666 - 6878164 | 92099.6 |
| ornithine decarboxylase | SAMN04244553_6428 | Not Available | Positive | 6878262 - 6879377 | 39551.9 |
| spermidine synthase | SAMN04244553_6429 | Not Available | Positive | 6879386 - 6880594 | 44112.1 |
| kef-type k+ transport system, membrane component kefb | SAMN04244553_6430 | Not Available | Negative | 6880850 - 6882241 | 49505.4 |
| 4-oxalocrotonate tautomerase | SAMN04244553_6431 | Not Available | Negative | 6882461 - 6882664 | 7396.88 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_6432 | Not Available | Negative | 6882664 - 6883401 | 24741.6 |
| transcriptional regulator, tetr family | SAMN04244553_6433 | Not Available | Negative | 6883481 - 6884071 | 21795.8 |
| gamma-glutamyl cyclotransferase, aig2-like | SAMN04244553_6434 | Not Available | Negative | 6884080 - 6884640 | 20243.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

