Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | SAMN04244553_6415 | Not Available | Negative | 6860517 - 6861821 | 45291.6 |
| hypothetical protein | SAMN04244553_6416 | Not Available | Positive | 6862060 - 6862800 | 26922.8 |
| methyltransferase small domain-containing protein | SAMN04244553_6417 | Not Available | Positive | 6863022 - 6864539 | 53872.6 |
| rna polymerase nonessential primary-like sigma factor | SAMN04244553_6418 | Not Available | Positive | 6864736 - 6865704 | 35923.1 |
| protein of unknown function | SAMN04244553_6419 | Not Available | Negative | 6865842 - 6866150 | 10525.4 |
| acyl-coa synthetase (ndp forming) | SAMN04244553_6420 | Not Available | Negative | 6866238 - 6868925 | 95357.1 |
| acetoin utilization protein acuc | SAMN04244553_6421 | Not Available | Negative | 6868918 - 6870183 | 45178.3 |
| iron (metal) dependent repressor, dtxr family | SAMN04244553_6422 | Not Available | Positive | 6870369 - 6871058 | 25423.6 |
| udp-galactose 4-epimerase | SAMN04244553_6423 | Not Available | Positive | 6871062 - 6872042 | 34698.9 |
| protein of unknown function | SAMN04244553_6424 | Not Available | Negative | 6872129 - 6873493 | 47774.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

