Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04244553_6405 | Not Available | Positive | 6851638 - 6852285 | 22398.1 |
| uncharacterized conserved protein, duf952 family | SAMN04244553_6406 | Not Available | Negative | 6852296 - 6852655 | 13251.9 |
| hypothetical protein | SAMN04244553_6407 | Not Available | Positive | 6852930 - 6853124 | 6856.21 |
| transcriptional regulator, tetr family | SAMN04244553_6408 | Not Available | Negative | 6853333 - 6854094 | 27211.8 |
| helicase conserved c-terminal domain-containing protein | SAMN04244553_6409 | Not Available | Positive | 6854222 - 6856036 | 64582.1 |
| hypothetical protein | SAMN04244553_6410 | Not Available | Positive | 6856036 - 6856590 | 20248.9 |
| superfamily ii dna or rna helicase | SAMN04244553_6411 | Not Available | Negative | 6856686 - 6858452 | 63299.1 |
| membrane protein | SAMN04244553_6412 | Not Available | Positive | 6858618 - 6859727 | 39788.1 |
| protein of unknown function | SAMN04244553_6413 | Not Available | Negative | 6859752 - 6859997 | 8824.47 |
| protein of unknown function | SAMN04244553_6414 | Not Available | Positive | 6860096 - 6860509 | 15108.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

