Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_6395 | Not Available | Negative | 6841634 - 6841936 | 10957.5 |
| lytr cell envelope-related transcriptional attenuator | SAMN04244553_6396 | Not Available | Positive | 6842314 - 6842991 | 23528.8 |
| myo-inositol-1(or 4)-monophosphatase | SAMN04244553_6397 | Not Available | Negative | 6843045 - 6843953 | 31139.7 |
| polyphosphate glucokinase | SAMN04244553_6398 | Not Available | Positive | 6844125 - 6844883 | 26007.1 |
| rna polymerase, sigma 70 subunit, rpod | SAMN04244553_6399 | Not Available | Positive | 6845118 - 6846491 | 50569.4 |
| mhyt domain-containing protein, no-binding membrane sensor | SAMN04244553_6400 | Not Available | Positive | 6846610 - 6847842 | 42557.5 |
| monovalent cation:h+ antiporter-2, cpa2 family | SAMN04244553_6401 | Not Available | Negative | 6847911 - 6849092 | 40308.6 |
| potassium/proton antiporter regulatory subunit, cpa2 family | SAMN04244553_6402 | Not Available | Negative | 6849096 - 6849578 | 16867.2 |
| sap, sulfolipid-1-addressing protein | SAMN04244553_6403 | Not Available | Negative | 6849604 - 6850299 | 23815.9 |
| signal transduction histidine kinase | SAMN04244553_6404 | Not Available | Positive | 6850409 - 6851641 | 42487.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

