Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04244553_6385 | Not Available | Negative | 6833159 - 6835162 | 72515.0 |
| trk system potassium uptake protein trka | SAMN04244553_6386 | Not Available | Positive | 6835266 - 6836009 | 26732.8 |
| trk system potassium uptake protein trka | SAMN04244553_6387 | Not Available | Positive | 6836012 - 6836683 | 24057.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_6388 | Not Available | Negative | 6836717 - 6837349 | 22731.5 |
| protein of unknown function | SAMN04244553_6389 | Not Available | Negative | 6837489 - 6838229 | 26448.1 |
| atp-dependent dna helicase recg | SAMN04244553_6390 | Not Available | Negative | 6838235 - 6838612 | 13831.5 |
| alpha/beta hydrolase family protein | SAMN04244553_6391 | Not Available | Positive | 6838706 - 6839458 | 25805.5 |
| protein of unknown function | SAMN04244553_6392 | Not Available | Negative | 6839642 - 6840496 | 30626.7 |
| dutp pyrophosphatase | SAMN04244553_6393 | Not Available | Negative | 6840504 - 6841004 | 17036.3 |
| protein of unknown function | SAMN04244553_6394 | Not Available | Positive | 6841091 - 6841579 | 18043.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

