Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | SAMN04244553_6375 | Not Available | Negative | 6821772 - 6822827 | 37505.3 |
| protein of unknown function | SAMN04244553_6376 | Not Available | Positive | 6822945 - 6823583 | 22821.8 |
| ribonuclease d | SAMN04244553_6377 | Not Available | Positive | 6823606 - 6824874 | 45611.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN04244553_6378 | Not Available | Negative | 6825275 - 6827173 | 66757.7 |
| l-glutaminase | SAMN04244553_6379 | Not Available | Positive | 6827322 - 6829280 | 69778.3 |
| hypothetical protein | SAMN04244553_6380 | Not Available | Positive | 6829346 - 6830029 | 23195.2 |
| enoyl-coa hydratase | SAMN04244553_6381 | Not Available | Positive | 6830118 - 6830921 | 29050.0 |
| hypothetical protein | SAMN04244553_6382 | Not Available | Negative | 6830974 - 6831339 | 12757.1 |
| uncharacterized conserved protein, duf1330 family | SAMN04244553_6383 | Not Available | Negative | 6831406 - 6831741 | 12509.7 |
| trna/tmrna/rrna uracil-c5-methylase, trma/rlmc/rlmd family | SAMN04244553_6384 | Not Available | Negative | 6831768 - 6833162 | 49575.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

