Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_6355 | Not Available | Negative | 6799610 - 6800566 | 36022.4 |
| hypothetical protein | SAMN04244553_6356 | Not Available | Positive | 6800936 - 6801994 | 37960.8 |
| transcriptional regulator, lysr family | SAMN04244553_6357 | Not Available | Negative | 6801995 - 6802900 | 32213.0 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_6358 | Not Available | Negative | 6802971 - 6804524 | 57070.7 |
| cytochrome p450 | SAMN04244553_6359 | Not Available | Negative | 6804654 - 6805970 | 48342.6 |
| cytochrome p450 | SAMN04244553_6360 | Not Available | Negative | 6806104 - 6807330 | 44855.7 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_6361 | Not Available | Negative | 6807389 - 6808885 | 54838.1 |
| ribosomal protein s18 acetylase rimi | SAMN04244553_6362 | Not Available | Positive | 6809399 - 6809938 | 19485.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_6363 | Not Available | Negative | 6809951 - 6810748 | 28360.5 |
| abc-2 type transport system atp-binding protein | SAMN04244553_6364 | Not Available | Positive | 6810804 - 6811688 | 32104.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

