Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_6345 | Not Available | Positive | 6792387 - 6792602 | 7770.43 |
| nucleoside-diphosphate-sugar epimerase | SAMN04244553_6346 | Not Available | Negative | 6792593 - 6794422 | 65592.1 |
| transcriptional regulator, tetr family | SAMN04244553_6347 | Not Available | Negative | 6794419 - 6795024 | 21085.4 |
| Trna-val | Not Available | Not Available | Positive | 6795421 - 6795492 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 6796009 - 6796084 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 6796127 - 6796197 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 6796199 - 6796273 | Not Available |
| sigma-70, region 4 | SAMN04244553_6352 | Not Available | Positive | 6796433 - 6797629 | 43844.9 |
| probable f420-dependent oxidoreductase, rv2161c family | SAMN04244553_6353 | Not Available | Positive | 6797767 - 6798990 | 44378.9 |
| stress responsive a/b barrel domain | SAMN04244553_6354 | Not Available | Positive | 6798987 - 6799589 | 22159.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

