Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | SAMN04244553_6315 | Not Available | Negative | 6762145 - 6762495 | 12847.1 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_6316 | Not Available | Negative | 6762736 - 6764226 | 54976.5 |
| transcriptional regulator, tetr family | SAMN04244553_6317 | Not Available | Positive | 6764262 - 6764954 | 25085.0 |
| diviva domain-containing protein | SAMN04244553_6318 | Not Available | Positive | 6765115 - 6765690 | 20815.3 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN04244553_6319 | Not Available | Negative | 6765709 - 6766224 | 19091.6 |
| holliday junction dna helicase subunit ruvb | SAMN04244553_6320 | Not Available | Negative | 6766331 - 6767416 | 38533.4 |
| holliday junction dna helicase subunit ruva | SAMN04244553_6321 | Not Available | Negative | 6767423 - 6768028 | 21032.6 |
| holliday junction endonuclease ruvc | SAMN04244553_6322 | Not Available | Negative | 6768025 - 6768594 | 20123.5 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04244553_6323 | Not Available | Negative | 6768684 - 6769190 | 17938.2 |
| hypothetical protein | SAMN04244553_6324 | Not Available | Positive | 6769266 - 6769472 | 7499.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

