Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN04244553_6304 | Not Available | Positive | 6749368 - 6750546 | 42647.8 |
| trans-aconitate methyltransferase | SAMN04244553_6305 | Not Available | Negative | 6750561 - 6751352 | 28594.8 |
| atpase components of abc transporters with duplicated atpase domains | SAMN04244553_6307 | Not Available | Negative | 6751727 - 6753346 | 58705.4 |
| transcriptional regulator, hxlr family | SAMN04244553_6308 | Not Available | Negative | 6753536 - 6754036 | 18090.8 |
| snoal-like domain-containing protein | SAMN04244553_6309 | Not Available | Positive | 6754116 - 6754547 | 15432.9 |
| hypothetical protein | SAMN04244553_6310 | Not Available | Negative | 6754527 - 6756578 | 73270.1 |
| adenine phosphoribosyltransferase | SAMN04244553_6311 | Not Available | Negative | 6756756 - 6757328 | 19829.8 |
| peptide/nickel transport system substrate-binding protein | SAMN04244553_6312 | Not Available | Negative | 6757366 - 6759078 | 59176.3 |
| preprotein translocase subunit secf | SAMN04244553_6313 | Not Available | Negative | 6759106 - 6760335 | 44024.3 |
| preprotein translocase subunit secd | SAMN04244553_6314 | Not Available | Negative | 6760332 - 6762041 | 59941.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

