Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted 2-oxoglutarate- and fe(ii)-dependent dioxygenase ybix | SAMN04244553_6294 | Not Available | Positive | 6738355 - 6739710 | 49968.7 |
| oligopeptide transport system substrate-binding protein | SAMN04244553_6295 | Not Available | Negative | 6739849 - 6741444 | 58054.9 |
| l-ornithine n5-oxygenase | SAMN04244553_6296 | Not Available | Positive | 6741647 - 6742942 | 48719.9 |
| cupin domain-containing protein | SAMN04244553_6297 | Not Available | Positive | 6742939 - 6743334 | 14737.2 |
| methionyl-trna synthetase | SAMN04244553_6298 | Not Available | Positive | 6743331 - 6744875 | 56226.4 |
| glycine/d-amino acid oxidase | SAMN04244553_6299 | Not Available | Positive | 6744877 - 6745920 | 36561.9 |
| atp-grasp domain-containing protein | SAMN04244553_6300 | Not Available | Positive | 6745937 - 6747235 | 45719.9 |
| hypothetical protein | SAMN04244553_6301 | Not Available | Positive | 6747232 - 6747555 | 11879.8 |
| hypothetical protein | SAMN04244553_6302 | Not Available | Positive | 6747552 - 6748001 | 15647.1 |
| fad/fmn-containing dehydrogenase | SAMN04244553_6303 | Not Available | Positive | 6747998 - 6749371 | 48443.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

