Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cutinase | SAMN04244553_6284 | Not Available | Negative | 6724553 - 6726190 | 54595.4 |
| gtp pyrophosphokinase | SAMN04244553_6285 | Not Available | Negative | 6726574 - 6729042 | 90513.4 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04244553_6286 | Not Available | Negative | 6729306 - 6730223 | 32184.1 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04244553_6287 | Not Available | Negative | 6730443 - 6731084 | 22999.6 |
| adenylosuccinate synthase | SAMN04244553_6288 | Not Available | Negative | 6731145 - 6732398 | 44980.5 |
| hypothetical protein | SAMN04244553_6289 | Not Available | Negative | 6732469 - 6733419 | 34815.1 |
| nb-arc domain-containing protein | SAMN04244553_6290 | Not Available | Positive | 6733804 - 6735189 | 49184.3 |
| 2-methylisocitrate lyase, pep mutase family | SAMN04244553_6291 | Not Available | Positive | 6735319 - 6736149 | 27987.0 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_6292 | Not Available | Positive | 6736247 - 6737599 | 46791.5 |
| ppox class probable f420-dependent enzyme, rv3369 family | SAMN04244553_6293 | Not Available | Positive | 6737819 - 6738268 | 16409.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

