Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | SAMN04244553_6264 | Not Available | Negative | 6703950 - 6704957 | 34805.1 |
| hypothetical protein | SAMN04244553_6265 | Not Available | Negative | 6705220 - 6705864 | 22815.2 |
| histidyl-trna synthetase | SAMN04244553_6266 | Not Available | Negative | 6705991 - 6707370 | 49175.8 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04244553_6267 | Not Available | Positive | 6707411 - 6708280 | 30468.4 |
| hypothetical protein | SAMN04244553_6268 | Not Available | Positive | 6708693 - 6709247 | 20390.5 |
| protein of unknown function | SAMN04244553_6269 | Not Available | Negative | 6709311 - 6709694 | 14957.8 |
| tram recognition site of trad and trag | SAMN04244553_6270 | Not Available | Negative | 6709768 - 6711612 | 66515.6 |
| hypothetical protein | SAMN04244553_6271 | Not Available | Negative | 6711653 - 6712285 | 22357.8 |
| membrane proteins related to metalloendopeptidases | SAMN04244553_6272 | Not Available | Negative | 6712282 - 6713946 | 56246.2 |
| transposase | SAMN04244553_6273 | Not Available | Negative | 6714008 - 6714313 | 11271.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

