Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04244553_6254 | Not Available | Negative | 6693033 - 6693908 | 32792.8 |
| hypothetical protein | SAMN04244553_6255 | Not Available | Positive | 6694155 - 6694631 | 17379.1 |
| protein of unknown function | SAMN04244553_6256 | Not Available | Positive | 6694601 - 6695047 | 16589.7 |
| hypothetical protein | SAMN04244553_6257 | Not Available | Negative | 6695145 - 6696791 | 53855.1 |
| excreted virulence factor espc, type vii esx diderm | SAMN04244553_6258 | Not Available | Negative | 6696788 - 6697114 | 10878.6 |
| dihydroflavonol-4-reductase | SAMN04244553_6259 | Not Available | Positive | 6697358 - 6698362 | 35613.1 |
| dna repair photolyase | SAMN04244553_6260 | Not Available | Positive | 6698394 - 6699416 | 37480.1 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | SAMN04244553_6261 | Not Available | Positive | 6699542 - 6701503 | 68972.1 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | SAMN04244553_6262 | Not Available | Positive | 6701503 - 6702582 | 38628.5 |
| small ligand-binding sensory domain fist | SAMN04244553_6263 | Not Available | Positive | 6702668 - 6703819 | 39728.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

