Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN04244553_0723 | Not Available | Negative | 543610 - 544401 | 27974.6 |
| diacylglycerol kinase family enzyme | SAMN04244553_0724 | Not Available | Negative | 544398 - 545351 | 33840.8 |
| fmn phosphatase yigb, had superfamily | SAMN04244553_0725 | Not Available | Negative | 545336 - 546073 | 27456.1 |
| uncharacterised nucleotidyltransferase | SAMN04244553_0726 | Not Available | Negative | 546070 - 547470 | 51683.0 |
| glycine c-acetyltransferase | SAMN04244553_0727 | Not Available | Negative | 547467 - 548768 | 46847.6 |
| pyruvate, water dikinase | SAMN04244553_0728 | Not Available | Negative | 548765 - 551500 | 98016.8 |
| cytochrome p450 | SAMN04244553_0729 | Not Available | Negative | 551544 - 552929 | 50766.2 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN04244553_0730 | Not Available | Negative | 552926 - 554647 | 59922.4 |
| acyl carrier protein | SAMN04244553_0731 | Not Available | Negative | 554644 - 554895 | 8978.49 |
| hypothetical protein | SAMN04244553_0732 | Not Available | Negative | 554892 - 555737 | 31074.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

