Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gxwxg protein | SAMN04244553_6214 | Not Available | Negative | 6644119 - 6644673 | 20408.8 |
| hypothetical protein | SAMN04244553_6215 | Not Available | Positive | 6645056 - 6645619 | 19780.1 |
| uncharacterized conserved protein ycii, contains a putative active-site phosphohistidine | SAMN04244553_6216 | Not Available | Negative | 6645891 - 6646154 | 9614.49 |
| nusb antitermination factor | SAMN04244553_6217 | Not Available | Negative | 6646151 - 6646711 | 20155.7 |
| translation elongation factor p (ef-p) | SAMN04244553_6218 | Not Available | Negative | 6646760 - 6647323 | 20387.2 |
| xaa-pro aminopeptidase | SAMN04244553_6219 | Not Available | Negative | 6647358 - 6648485 | 40377.1 |
| leader peptidase (prepilin peptidase) / n-methyltransferase | SAMN04244553_6220 | Not Available | Positive | 6648786 - 6649238 | 15029.6 |
| chorismate synthase | SAMN04244553_6221 | Not Available | Positive | 6649421 - 6650629 | 41957.1 |
| shikimate kinase | SAMN04244553_6222 | Not Available | Positive | 6650626 - 6652146 | 52798.3 |
| 3-dehydroquinate synthase | SAMN04244553_6223 | Not Available | Positive | 6652143 - 6653264 | 39274.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

