Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04244553_6194 | Not Available | Positive | 6619800 - 6620645 | 29158.7 |
| replication restart dna helicase pria | SAMN04244553_6195 | Not Available | Negative | 6620854 - 6623595 | 94494.5 |
| methionine adenosyltransferase | SAMN04244553_6196 | Not Available | Negative | 6623662 - 6624873 | 43019.1 |
| phosphopantothenate-cysteine ligase /phosphopantothenoylcysteine decarboxylase | SAMN04244553_6197 | Not Available | Negative | 6625130 - 6626359 | 42692.4 |
| dna-directed rna polymerase subunit omega | SAMN04244553_6198 | Not Available | Negative | 6626436 - 6626711 | 10104.9 |
| guanylate kinase | SAMN04244553_6199 | Not Available | Negative | 6626814 - 6627395 | 21179.3 |
| hypothetical protein | SAMN04244553_6200 | Not Available | Negative | 6627404 - 6627724 | 11682.4 |
| orotidine-5'-phosphate decarboxylase | SAMN04244553_6201 | Not Available | Negative | 6628353 - 6629177 | 28280.7 |
| carbamoyl-phosphate synthase large subunit | SAMN04244553_6202 | Not Available | Negative | 6629267 - 6632599 | 119364.0 |
| carbamoyl-phosphate synthase small subunit | SAMN04244553_6203 | Not Available | Negative | 6632599 - 6633711 | 39799.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

