Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-[acyl-carrier-protein] desaturase | SAMN04244553_6159 | Not Available | Negative | 6597570 - 6598535 | 36536.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 6599153 - 6599223 | Not Available |
| hypothetical protein | SAMN04244553_6162 | Not Available | Positive | 6599447 - 6600283 | 30706.6 |
| hypothetical protein | SAMN04244553_6163 | Not Available | Negative | 6600315 - 6601553 | 44263.6 |
| aaa domain-containing protein | SAMN04244553_6164 | Not Available | Negative | 6601556 - 6602380 | 30367.2 |
| hypothetical protein | SAMN04244553_6165 | Not Available | Positive | 6602583 - 6602798 | 7656.37 |
| hypothetical protein | SAMN04244553_6166 | Not Available | Positive | 6602798 - 6602953 | 5670.27 |
| helix-turn-helix domain-containing protein | SAMN04244553_6168 | Not Available | Positive | 6602983 - 6603264 | 10510.5 |
| cbs domain-containing protein | SAMN04244553_6169 | Not Available | Negative | 6603353 - 6603931 | 20853.1 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04244553_6170 | Not Available | Negative | 6604079 - 6605608 | 54406.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

