Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mycothiol synthase | SAMN04244553_6149 | Not Available | Positive | 6585148 - 6586050 | 32371.3 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN04244553_6150 | Not Available | Positive | 6586460 - 6587659 | 40920.8 |
| phosphate abc transporter membrane protein 1, phot family | SAMN04244553_6151 | Not Available | Positive | 6587751 - 6588725 | 33970.8 |
| phosphate abc transporter membrane protein 2, phot family | SAMN04244553_6152 | Not Available | Positive | 6588725 - 6589630 | 32207.4 |
| phosphate abc transporter atp-binding protein, phot family | SAMN04244553_6153 | Not Available | Positive | 6589649 - 6590425 | 28152.9 |
| phosphate transport system protein | SAMN04244553_6154 | Not Available | Negative | 6590687 - 6591349 | 24173.0 |
| transcriptional attenuator, lytr family | SAMN04244553_6155 | Not Available | Negative | 6591509 - 6593464 | 68514.3 |
| putative tim-barrel protein, nifr3 family | SAMN04244553_6156 | Not Available | Negative | 6594399 - 6595541 | 40654.0 |
| short-chain dehydrogenase | SAMN04244553_6157 | Not Available | Negative | 6595767 - 6596621 | 29825.1 |
| mce-associated membrane protein | SAMN04244553_6158 | Not Available | Positive | 6596844 - 6597497 | 23063.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

