Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily c, cydd | SAMN04244553_6138 | Not Available | Positive | 6575812 - 6577692 | 65099.1 |
| atp-binding cassette, subfamily c, cydc | SAMN04244553_6139 | Not Available | Positive | 6577689 - 6579431 | 60162.7 |
| protein of unknown function | SAMN04244553_6141 | Not Available | Negative | 6579718 - 6580422 | 25117.2 |
| hypothetical protein | SAMN04244553_6142 | Not Available | Negative | 6580419 - 6580514 | 3715.75 |
| protein of unknown function | SAMN04244553_6143 | Not Available | Negative | 6580608 - 6580913 | 10071.8 |
| thiosulfate sulfurtransferase | SAMN04244553_6144 | Not Available | Negative | 6580919 - 6581752 | 30807.7 |
| protein of unknown function | SAMN04244553_6145 | Not Available | Negative | 6581782 - 6582354 | 19507.8 |
| thioredoxin | SAMN04244553_6146 | Not Available | Negative | 6582633 - 6583079 | 15403.6 |
| protein of unknown function | SAMN04244553_6147 | Not Available | Negative | 6583076 - 6583888 | 28454.1 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04244553_6148 | Not Available | Positive | 6583902 - 6584825 | 32774.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

