Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, marr family | SAMN04244553_6108 | Not Available | Positive | 6540419 - 6540844 | 15760.0 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN04244553_6109 | Not Available | Negative | 6540905 - 6541978 | 37957.3 |
| aspartyl aminopeptidase | SAMN04244553_6110 | Not Available | Positive | 6542112 - 6543395 | 45618.0 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04244553_6111 | Not Available | Negative | 6543405 - 6543878 | 17595.7 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04244553_6112 | Not Available | Negative | 6543900 - 6544370 | 17646.6 |
| transcriptional regulator, contains xre-family hth domain | SAMN04244553_6113 | Not Available | Negative | 6544382 - 6545728 | 49592.9 |
| hypothetical protein | SAMN04244553_6114 | Not Available | Positive | 6545840 - 6546094 | 9504.28 |
| hypothetical protein | SAMN04244553_6115 | Not Available | Positive | 6546153 - 6547616 | 53978.2 |
| alpha-1,2-mannosyltransferase | SAMN04244553_6116 | Not Available | Negative | 6547625 - 6548848 | 44384.2 |
| phosphoribosylformylglycinamidine synthase subunit ii | SAMN04244553_6117 | Not Available | Positive | 6549078 - 6551372 | 81177.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

