Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lgfp repeat-containing protein | SAMN04244553_6088 | Not Available | Negative | 6518393 - 6520144 | 64381.5 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN04244553_6089 | Not Available | Negative | 6520706 - 6521131 | 15172.0 |
| ph domain-containing protein | SAMN04244553_6090 | Not Available | Negative | 6521163 - 6521540 | 13976.8 |
| phosphoribosylamine--glycine ligase | SAMN04244553_6091 | Not Available | Positive | 6521766 - 6523043 | 43370.7 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN04244553_6092 | Not Available | Negative | 6523165 - 6524124 | 35007.0 |
| aspartate/methionine/tyrosine aminotransferase | SAMN04244553_6093 | Not Available | Positive | 6524211 - 6525422 | 43190.5 |
| transcriptional regulator, tetr family | SAMN04244553_6094 | Not Available | Positive | 6525552 - 6526190 | 23383.0 |
| adenylosuccinate lyase | SAMN04244553_6095 | Not Available | Positive | 6526197 - 6527618 | 51645.2 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN04244553_6096 | Not Available | Positive | 6527869 - 6528303 | 15264.4 |
| s-formylglutathione hydrolase frmb | SAMN04244553_6097 | Not Available | Positive | 6528439 - 6529398 | 34031.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

