Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce-associated membrane protein | SAMN04244553_6078 | Not Available | Positive | 6509485 - 6509973 | 17299.4 |
| two-component system, ompr family, sensor kinase | SAMN04244553_6079 | Not Available | Negative | 6510008 - 6511450 | 51717.9 |
| two-component system, ompr family, response regulator | SAMN04244553_6080 | Not Available | Negative | 6511756 - 6512490 | 27169.7 |
| trehalose 6-phosphate synthase | SAMN04244553_6081 | Not Available | Negative | 6512555 - 6514144 | 59012.6 |
| hypothetical protein | SAMN04244553_6082 | Not Available | Negative | 6514306 - 6514476 | 5880.83 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_6083 | Not Available | Positive | 6514679 - 6515512 | 29641.7 |
| mbth protein | SAMN04244553_6084 | Not Available | Positive | 6515665 - 6515907 | 9039.31 |
| Trna-thr | Not Available | Not Available | Positive | 6516019 - 6516090 | Not Available |
| hypothetical protein | SAMN04244553_6086 | Not Available | Positive | 6516561 - 6517235 | 24489.1 |
| zn-dependent peptidase imma, m78 family | SAMN04244553_6087 | Not Available | Positive | 6517273 - 6518331 | 38720.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

