Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [nife]-hydrogenase i apoprotein, small subunit | SAMN04244553_0703 | Not Available | Negative | 523191 - 524246 | 37766.1 |
| hydrogenase nickel incorporation protein hypb | SAMN04244553_0704 | Not Available | Negative | 524331 - 525164 | 30328.9 |
| hydrogenase nickel incorporation protein hypa/hybf | SAMN04244553_0705 | Not Available | Negative | 525161 - 525532 | 12997.8 |
| arylsulfatase a | SAMN04244553_0706 | Not Available | Negative | 525668 - 527155 | 52987.1 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04244553_0707 | Not Available | Negative | 527298 - 527771 | 17521.3 |
| transcriptional regulator, tetr family | SAMN04244553_0708 | Not Available | Negative | 527800 - 528438 | 23259.4 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04244553_0709 | Not Available | Positive | 528593 - 529249 | 23286.3 |
| hypothetical protein | SAMN04244553_0710 | Not Available | Positive | 529531 - 530154 | 22523.7 |
| hypothetical protein | SAMN04244553_0711 | Not Available | Positive | 530453 - 530695 | 9033.82 |
| hypothetical protein | SAMN04244553_0712 | Not Available | Positive | 530930 - 531091 | 5109.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

