Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | SAMN04244553_6037 | Not Available | Positive | 6466379 - 6467563 | 41809.8 |
| nad(p)h-dependent flavin oxidoreductase yrpb, nitropropane dioxygenase family | SAMN04244553_6038 | Not Available | Negative | 6467897 - 6468976 | 37551.6 |
| acyl coa:acetate/3-ketoacid coa transferase, beta subunit | SAMN04244553_6039 | Not Available | Negative | 6468976 - 6469731 | 27141.4 |
| acyl coa:acetate/3-ketoacid coa transferase, alpha subunit | SAMN04244553_6040 | Not Available | Negative | 6469736 - 6470614 | 31882.9 |
| enoyl-coa hydratase | SAMN04244553_6041 | Not Available | Negative | 6470641 - 6471405 | 27171.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_6042 | Not Available | Positive | 6471492 - 6472283 | 26944.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_6043 | Not Available | Positive | 6472316 - 6473224 | 31214.9 |
| protein of unknown function | SAMN04244553_6045 | Not Available | Positive | 6475011 - 6475526 | 18545.7 |
| hypothetical protein | SAMN04244553_6046 | Not Available | Positive | 6475523 - 6476545 | 35850.1 |
| transcriptional regulator, contains xre-family hth domain | SAMN04244553_6047 | Not Available | Negative | 6476975 - 6477391 | 15244.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

