Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl dehydratase | SAMN04244553_5995 | Not Available | Negative | 6426784 - 6427644 | 30980.6 |
| 3-oxosteroid 1-dehydrogenase | SAMN04244553_5996 | Not Available | Negative | 6428076 - 6429821 | 62445.4 |
| 3-oxo-5alpha-steroid 4-dehydrogenase | SAMN04244553_5997 | Not Available | Positive | 6429906 - 6431531 | 57286.2 |
| 2-keto-4-pentenoate hydratase | SAMN04244553_5998 | Not Available | Positive | 6431533 - 6432318 | 28275.7 |
| acetaldehyde dehydrogenase | SAMN04244553_5999 | Not Available | Positive | 6432329 - 6433237 | 31597.8 |
| 4-hydroxy 2-oxovalerate aldolase | SAMN04244553_6000 | Not Available | Positive | 6433250 - 6434287 | 36574.7 |
| s-adenosyl methyltransferase | SAMN04244553_6001 | Not Available | Positive | 6434660 - 6435466 | 29594.9 |
| hypothetical protein | SAMN04244553_6002 | Not Available | Positive | 6435518 - 6435664 | 5400.34 |
| helix-turn-helix domain-containing protein | SAMN04244553_6003 | Not Available | Negative | 6435675 - 6436073 | 14211.0 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04244553_6004 | Not Available | Negative | 6436073 - 6436729 | 23179.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

