Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc/manganese transport system atp-binding protein | SAMN04244553_5975 | Not Available | Negative | 6405198 - 6406103 | 32146.6 |
| zinc/manganese transport system substrate-binding protein | SAMN04244553_5976 | Not Available | Negative | 6406130 - 6407005 | 30558.5 |
| trehalose 6-phosphatase | SAMN04244553_5977 | Not Available | Negative | 6407199 - 6409769 | 92708.3 |
| transcriptional regulator, tetr family | SAMN04244553_5978 | Not Available | Negative | 6410162 - 6410812 | 23817.7 |
| acyl-coa dehydrogenase | SAMN04244553_5979 | Not Available | Positive | 6410960 - 6413128 | 75571.5 |
| hypothetical protein | SAMN04244553_5980 | Not Available | Positive | 6413152 - 6414216 | 37262.8 |
| hypothetical protein | SAMN04244553_5981 | Not Available | Positive | 6414201 - 6415361 | 42728.6 |
| uncharacterized ob-fold protein, contains zn-ribbon domain | SAMN04244553_5982 | Not Available | Positive | 6415378 - 6416316 | 33977.7 |
| maoc like domain-containing protein | SAMN04244553_5983 | Not Available | Positive | 6416448 - 6416840 | 13900.6 |
| acetyl-coa acetyltransferase | SAMN04244553_5984 | Not Available | Positive | 6416833 - 6418011 | 41062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

