Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation protein hypf | SAMN04244553_0693 | Not Available | Negative | 514321 - 516639 | 81809.0 |
| hydrogenase expression/formation protein hypc | SAMN04244553_0694 | Not Available | Negative | 516636 - 516878 | 8557.37 |
| hydrogenase maturation protease | SAMN04244553_0695 | Not Available | Negative | 516882 - 517343 | 15864.0 |
| hypothetical protein | SAMN04244553_0696 | Not Available | Negative | 517357 - 517677 | 10982.0 |
| hypothetical protein | SAMN04244553_0697 | Not Available | Negative | 517696 - 517815 | 4241.43 |
| hypothetical protein | SAMN04244553_0698 | Not Available | Negative | 517829 - 519181 | 48858.9 |
| hypothetical protein | SAMN04244553_0699 | Not Available | Negative | 519178 - 519825 | 23906.3 |
| hypothetical protein | SAMN04244553_0700 | Not Available | Negative | 519822 - 520454 | 23711.4 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN04244553_0701 | Not Available | Negative | 520451 - 521380 | 32088.0 |
| hydrogenase large subunit | SAMN04244553_0702 | Not Available | Negative | 521384 - 523180 | 67586.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

