Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | SAMN04244553_5935 | Not Available | Positive | 6366071 - 6366997 | 32503.2 |
| l-aspartate 1-decarboxylase | SAMN04244553_5936 | Not Available | Positive | 6367014 - 6367475 | 16288.5 |
| type iii pantothenate kinase | SAMN04244553_5937 | Not Available | Positive | 6367505 - 6368299 | 28400.3 |
| cysteine dioxygenase type i | SAMN04244553_5938 | Not Available | Positive | 6368489 - 6369085 | 21445.3 |
| rhodanese-related sulfurtransferase | SAMN04244553_5939 | Not Available | Positive | 6369085 - 6369516 | 15471.6 |
| lysyl-trna synthetase, class ii | SAMN04244553_5940 | Not Available | Positive | 6369781 - 6371286 | 55513.5 |
| lsr2 protein | SAMN04244553_5941 | Not Available | Positive | 6371442 - 6371801 | 12818.0 |
| regulatory protein, luxr family | SAMN04244553_5942 | Not Available | Positive | 6371993 - 6372616 | 22650.1 |
| uncharacterized membrane protein | SAMN04244553_5943 | Not Available | Positive | 6372747 - 6373340 | 20485.3 |
| lipase (class 2) | SAMN04244553_5944 | Not Available | Positive | 6373445 - 6374389 | 32440.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

