Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_5925 | Not Available | Positive | 6355721 - 6356557 | 31672.5 |
| hypothetical protein | SAMN04244553_5926 | Not Available | Negative | 6356698 - 6357651 | 34108.9 |
| cell division protease ftsh | SAMN04244553_5927 | Not Available | Positive | 6358071 - 6360557 | 89664.8 |
| gtp cyclohydrolase i | SAMN04244553_5928 | Not Available | Positive | 6360632 - 6361315 | 24842.8 |
| dihydropteroate synthase | SAMN04244553_5929 | Not Available | Positive | 6361327 - 6362205 | 30331.0 |
| dihydroneopterin aldolase | SAMN04244553_5930 | Not Available | Positive | 6362202 - 6362639 | 15802.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN04244553_5931 | Not Available | Positive | 6362636 - 6363184 | 19756.3 |
| protein of unknown function | SAMN04244553_5932 | Not Available | Positive | 6363181 - 6363657 | 16512.2 |
| hypothetical protein | SAMN04244553_5933 | Not Available | Positive | 6363785 - 6364771 | 35547.3 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04244553_5934 | Not Available | Positive | 6365091 - 6366071 | 33705.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

