Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04244553_5905 | Not Available | Negative | 6332208 - 6332759 | 20087.8 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN04244553_5906 | Not Available | Negative | 6332859 - 6333362 | 17843.6 |
| enoyl-coa hydratase | SAMN04244553_5907 | Not Available | Positive | 6333434 - 6334255 | 29344.2 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_5908 | Not Available | Positive | 6334335 - 6334832 | 18819.4 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_5909 | Not Available | Positive | 6334829 - 6336613 | 62625.5 |
| hypothetical protein | SAMN04244553_5910 | Not Available | Positive | 6336908 - 6337150 | 8455.77 |
| inorganic pyrophosphatase | SAMN04244553_5911 | Not Available | Negative | 6337309 - 6337800 | 18325.5 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04244553_5912 | Not Available | Positive | 6338031 - 6339437 | 47485.8 |
| putative hydrolase/uncharacterized protein, coenzyme f420 biosynthesis associated | SAMN04244553_5913 | Not Available | Positive | 6339451 - 6340566 | 40053.9 |
| trna(ile)-lysidine synthase | SAMN04244553_5914 | Not Available | Positive | 6341170 - 6342171 | 34505.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

