Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx-like family protein | SAMN04244553_5894 | Not Available | Negative | 6319448 - 6319801 | 11998.1 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_5895 | Not Available | Positive | 6319893 - 6320786 | 32940.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_5896 | Not Available | Negative | 6320838 - 6321893 | 37224.0 |
| hypothetical protein | SAMN04244553_5897 | Not Available | Positive | 6322293 - 6322670 | 13681.0 |
| protein of unknown function | SAMN04244553_5898 | Not Available | Positive | 6322780 - 6323241 | 16801.7 |
| hypothetical protein | SAMN04244553_5899 | Not Available | Positive | 6324004 - 6324189 | 6897.01 |
| aminopeptidase | SAMN04244553_5900 | Not Available | Negative | 6324203 - 6325552 | 50372.6 |
| non-ribosomal peptide synthetase terminal domain of unknown function | SAMN04244553_5901 | Not Available | Negative | 6325552 - 6329463 | 137703.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04244553_5902 | Not Available | Negative | 6329695 - 6330327 | 21762.1 |
| selenocysteine lyase/cysteine desulfurase | SAMN04244553_5903 | Not Available | Positive | 6330576 - 6331895 | 46386.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

