Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport system permease protein | SAMN04244553_5872 | Not Available | Positive | 6292603 - 6293529 | 33668.3 |
| oligopeptide transport system permease protein | SAMN04244553_5873 | Not Available | Positive | 6293522 - 6294475 | 34058.8 |
| peptide/nickel transport system atp-binding protein | SAMN04244553_5874 | Not Available | Positive | 6294484 - 6296157 | 60240.5 |
| hypothetical protein | SAMN04244553_5875 | Not Available | Positive | 6296186 - 6296932 | 25787.6 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN04244553_5876 | Not Available | Negative | 6297545 - 6298414 | 31384.3 |
| helicase/secretion neighborhood cpae-like protein | SAMN04244553_5878 | Not Available | Positive | 6298782 - 6299894 | 37294.8 |
| pilus assembly protein cpaf | SAMN04244553_5879 | Not Available | Positive | 6299891 - 6301078 | 41143.8 |
| tight adherence protein b | SAMN04244553_5880 | Not Available | Positive | 6301233 - 6302021 | 26959.2 |
| type ii secretion system (t2ss), protein f | SAMN04244553_5881 | Not Available | Positive | 6302118 - 6302732 | 20360.9 |
| hypothetical protein | SAMN04244553_5883 | Not Available | Positive | 6303767 - 6304099 | 11162.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

