Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN04244553_5862 | Not Available | Positive | 6281272 - 6282027 | 27872.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN04244553_5863 | Not Available | Positive | 6282093 - 6282704 | 20473.8 |
| nudix domain-containing protein | SAMN04244553_5864 | Not Available | Positive | 6282838 - 6283557 | 25957.0 |
| colicin v production protein | SAMN04244553_5865 | Not Available | Positive | 6283554 - 6284747 | 40497.2 |
| hypothetical protein | SAMN04244553_5866 | Not Available | Negative | 6284817 - 6285152 | 12106.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_5867 | Not Available | Negative | 6285569 - 6286504 | 35140.0 |
| putative holin-x, holin superfamily iii | SAMN04244553_5868 | Not Available | Negative | 6286557 - 6287063 | 18276.2 |
| na+:h+ antiporter, nhaa family | SAMN04244553_5869 | Not Available | Negative | 6287176 - 6288396 | 43076.4 |
| acetyl-coa synthetase | SAMN04244553_5870 | Not Available | Negative | 6288642 - 6290672 | 74643.5 |
| oligopeptide transport system substrate-binding protein | SAMN04244553_5871 | Not Available | Positive | 6290971 - 6292578 | 58830.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

