Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5852 | Not Available | Positive | 6272478 - 6272942 | 16578.0 |
| membrane carboxypeptidase (penicillin-binding protein) | SAMN04244553_5853 | Not Available | Negative | 6273003 - 6275357 | 82596.2 |
| whib family transcriptional regulator, redox-sensing transcriptional regulator | SAMN04244553_5854 | Not Available | Positive | 6275735 - 6276058 | 12204.7 |
| arsenite efflux atp-binding protein arsa (tc 3.a.4.1.1) | SAMN04244553_5855 | Not Available | Negative | 6276145 - 6277257 | 39780.3 |
| anion-transporting atpase, arsa/get3 family | SAMN04244553_5856 | Not Available | Negative | 6277254 - 6278273 | 36000.2 |
| protein of unknown function | SAMN04244553_5857 | Not Available | Positive | 6278473 - 6278637 | 6118.3 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04244553_5858 | Not Available | Positive | 6278641 - 6279114 | 16057.3 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04244553_5859 | Not Available | Positive | 6279157 - 6279948 | 28191.5 |
| transcriptional regulator /transcriptional regulator, crp/fnr family | SAMN04244553_5860 | Not Available | Negative | 6280049 - 6280723 | 24747.8 |
| hypothetical protein | SAMN04244553_5861 | Not Available | Negative | 6280860 - 6281087 | 8622.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

