Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-tyrosine-phosphatase | SAMN04244553_5842 | Not Available | Positive | 6258725 - 6259393 | 24339.2 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04244553_5843 | Not Available | Negative | 6259419 - 6260663 | 44377.5 |
| allophanate hydrolase | SAMN04244553_5844 | Not Available | Negative | 6260814 - 6262541 | 58814.1 |
| urea carboxylase | SAMN04244553_5845 | Not Available | Negative | 6262538 - 6266140 | 127051.0 |
| dna-binding transcriptional regulator, gntr family | SAMN04244553_5846 | Not Available | Negative | 6266151 - 6266858 | 26318.7 |
| transcriptional regulator, tetr family | SAMN04244553_5847 | Not Available | Negative | 6267416 - 6267982 | 21058.1 |
| monoamine oxidase | SAMN04244553_5848 | Not Available | Positive | 6268062 - 6269435 | 48989.4 |
| Trna-pro | Not Available | Not Available | Positive | 6269599 - 6269672 | Not Available |
| hypothetical protein | SAMN04244553_5850 | Not Available | Negative | 6269733 - 6270407 | 22393.9 |
| predicted phosphohydrolase, mpp superfamily | SAMN04244553_5851 | Not Available | Negative | 6271362 - 6272324 | 34753.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

