Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-formylglutathione hydrolase frmb | SAMN04244553_0683 | Not Available | Positive | 504343 - 505392 | 36077.0 |
| luciferase family oxidoreductase, group 1 | SAMN04244553_0684 | Not Available | Positive | 505437 - 506459 | 36916.9 |
| acyl dehydratase | SAMN04244553_0685 | Not Available | Negative | 506473 - 507408 | 33757.5 |
| duf218 domain-containing protein | SAMN04244553_0686 | Not Available | Negative | 507452 - 508075 | 21143.5 |
| lipase (class 2) | SAMN04244553_0687 | Not Available | Positive | 508489 - 509697 | 41091.4 |
| high-affinity nickel-transport protein | SAMN04244553_0688 | Not Available | Negative | 509869 - 511002 | 40996.5 |
| hypothetical protein | SAMN04244553_0689 | Not Available | Negative | 510999 - 511796 | 28630.9 |
| hydrogenase expression/formation protein hype | SAMN04244553_0690 | Not Available | Negative | 511798 - 512874 | 36287.8 |
| hydrogenase expression/formation protein hypd | SAMN04244553_0691 | Not Available | Negative | 512867 - 513979 | 40563.9 |
| hydrogenase expression/formation protein hypc | SAMN04244553_0692 | Not Available | Negative | 513976 - 514302 | 11619.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

