Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_5832 | Not Available | Negative | 6248840 - 6249466 | 22277.1 |
| alkane 1-monooxygenase | SAMN04244553_5833 | Not Available | Positive | 6249591 - 6250808 | 46432.0 |
| rubredoxin | SAMN04244553_5834 | Not Available | Positive | 6250808 - 6250993 | 6778.83 |
| rubredoxin | SAMN04244553_5835 | Not Available | Positive | 6250990 - 6251175 | 6924.86 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN04244553_5836 | Not Available | Positive | 6251172 - 6252404 | 43443.7 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04244553_5837 | Not Available | Positive | 6252717 - 6253166 | 15816.7 |
| catalase | SAMN04244553_5838 | Not Available | Positive | 6253237 - 6254727 | 55910.1 |
| transcriptional regulator, tetr family | SAMN04244553_5839 | Not Available | Negative | 6254800 - 6255537 | 26430.5 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_5840 | Not Available | Positive | 6255692 - 6257242 | 53186.6 |
| hypothetical protein | SAMN04244553_5841 | Not Available | Positive | 6257873 - 6258364 | 17382.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

