Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_5812 | Not Available | Positive | 6227587 - 6227925 | 13049.0 |
| 2-isopropylmalate synthase | SAMN04244553_5813 | Not Available | Negative | 6228040 - 6229833 | 65668.3 |
| hypothetical protein | SAMN04244553_5814 | Not Available | Positive | 6230100 - 6230867 | 26200.1 |
| alpha/beta hydrolase fold | SAMN04244553_5815 | Not Available | Positive | 6230955 - 6232628 | 60092.9 |
| cholesterol oxidase | SAMN04244553_5816 | Not Available | Positive | 6232735 - 6234354 | 57704.0 |
| hypothetical protein | SAMN04244553_5817 | Not Available | Positive | 6234376 - 6235299 | 34806.5 |
| low temperature requirement protein ltra | SAMN04244553_5818 | Not Available | Negative | 6235360 - 6236541 | 42597.9 |
| hypothetical protein | SAMN04244553_5819 | Not Available | Negative | 6236706 - 6237161 | 17240.0 |
| protein of unknown function | SAMN04244553_5820 | Not Available | Negative | 6237418 - 6237603 | 6589.67 |
| transcriptional regulator, tetr family | SAMN04244553_5821 | Not Available | Negative | 6237662 - 6238234 | 21602.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

