Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridine nucleotide-disulphide oxidoreductase | SAMN04244553_5801 | Not Available | Positive | 6214699 - 6215644 | 34486.9 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN04244553_5803 | Not Available | Positive | 6215645 - 6216619 | 34165.1 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN04244553_5804 | Not Available | Positive | 6216616 - 6217524 | 33004.2 |
| hypothetical protein | SAMN04244553_5805 | Not Available | Negative | 6217611 - 6218321 | 24885.9 |
| udp-n-acetylmuramyl tripeptide synthase | SAMN04244553_5806 | Not Available | Negative | 6218314 - 6219534 | 42985.1 |
| hypothetical protein | SAMN04244553_5807 | Not Available | Negative | 6219788 - 6220420 | 23531.0 |
| nad-binding domain and a fe-s cluster-containing protein | SAMN04244553_5808 | Not Available | Negative | 6220443 - 6222179 | 63802.4 |
| o-acetylserine/cysteine efflux transporter | SAMN04244553_5809 | Not Available | Negative | 6222659 - 6223600 | 32748.8 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_5810 | Not Available | Positive | 6223687 - 6224610 | 32680.4 |
| mind-like atpase involved in chromosome partitioning or flagellar assembly | SAMN04244553_5811 | Not Available | Negative | 6225608 - 6227446 | 64293.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

