Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical integral membrane protein | SAMN04244553_5791 | Not Available | Negative | 6205286 - 6206374 | 36848.7 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_5792 | Not Available | Positive | 6206496 - 6207413 | 32411.1 |
| gntr family transcriptional regulator | SAMN04244553_5793 | Not Available | Positive | 6207548 - 6208333 | 27904.5 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN04244553_5794 | Not Available | Positive | 6208345 - 6210108 | 63985.0 |
| heat repeat | SAMN04244553_5795 | Not Available | Positive | 6210105 - 6211010 | 31171.9 |
| 4fe-4s dicluster domain-containing protein | SAMN04244553_5796 | Not Available | Positive | 6211010 - 6211237 | 8130.94 |
| nitt/taut family transport system substrate-binding protein | SAMN04244553_5797 | Not Available | Positive | 6211258 - 6212679 | 49413.6 |
| nitt/taut family transport system permease protein | SAMN04244553_5798 | Not Available | Positive | 6212713 - 6213588 | 30974.5 |
| nitt/taut family transport system atp-binding protein | SAMN04244553_5799 | Not Available | Positive | 6213585 - 6214370 | 27978.0 |
| nad-dependent dihydropyrimidine dehydrogenase, prea subunit | SAMN04244553_5800 | Not Available | Positive | 6214367 - 6214702 | 11867.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

