Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_5781 | Not Available | Negative | 6193907 - 6195286 | 50548.6 |
| hypothetical protein | SAMN04244553_5782 | Not Available | Positive | 6195553 - 6196323 | 26103.1 |
| trna dimethylallyltransferase | SAMN04244553_5783 | Not Available | Positive | 6196320 - 6197240 | 33793.4 |
| rna methyltransferase, trmh family | SAMN04244553_5784 | Not Available | Positive | 6197237 - 6198073 | 29764.1 |
| diaminopimelate epimerase | SAMN04244553_5785 | Not Available | Positive | 6198096 - 6198986 | 31077.6 |
| gtp-binding protein hflx | SAMN04244553_5786 | Not Available | Positive | 6199045 - 6200604 | 55910.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04244553_5787 | Not Available | Positive | 6200936 - 6201796 | 31607.5 |
| s-formylglutathione hydrolase frmb | SAMN04244553_5788 | Not Available | Positive | 6201864 - 6202913 | 36300.6 |
| acyl-coa dehydrogenase | SAMN04244553_5789 | Not Available | Positive | 6203119 - 6204264 | 42309.9 |
| hypothetical protein | SAMN04244553_5790 | Not Available | Negative | 6204476 - 6205141 | 24075.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

