Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein reca | SAMN04244553_5770 | Not Available | Positive | 6183717 - 6184760 | 36984.2 |
| regulatory protein | SAMN04244553_5771 | Not Available | Positive | 6185110 - 6185700 | 21246.9 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN04244553_5772 | Not Available | Positive | 6186208 - 6187062 | 30463.5 |
| glutamate transport system permease protein | SAMN04244553_5773 | Not Available | Negative | 6187148 - 6188044 | 32213.3 |
| amino acid abc transporter membrane protein 1, paat family | SAMN04244553_5774 | Not Available | Negative | 6188041 - 6188712 | 23866.6 |
| glutamate transport system substrate-binding protein | SAMN04244553_5775 | Not Available | Negative | 6188810 - 6189643 | 29427.8 |
| glutamate transport system atp-binding protein | SAMN04244553_5776 | Not Available | Negative | 6189697 - 6190506 | 28978.2 |
| pp_05375 | SAMN04244553_5777 | Not Available | Positive | 6190689 - 6192221 | Not Available |
| hypothetical protein | SAMN04244553_5778 | Not Available | Positive | 6192446 - 6193024 | 20954.6 |
| vanz like family protein | SAMN04244553_5780 | Not Available | Negative | 6193280 - 6193849 | 20676.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

